GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLCA | trans | rs7833787 | 1 | rs6586778 | chr8:18706170 | KCTD15 | chr19:34287751-34306665:+ | -0.3 | -5.96 | 5.66E-9 | Obesity-related traits |
| BLCA | trans | rs10514688 | 1 | rs6801365 | chr3:34953109 | RXFP2 | chr13:32313679-32377008:+ | 0.35 | 6.01 | 4.36E-9 | Tonometry |
| BLCA | trans | rs62295889 | 1 | rs6842440 | chr4:12477324 | KRTAP13-1 | chr21:31768392-31769136:+ | 0.14 | 5.99 | 4.84E-9 | Obesity-related traits |
| BLCA | trans | rs10037055 | 1 | rs6886255 | chr5:176718361 | LOC388955 | chr2:63849182-63850159:- | 0.55 | 12.18 | 4.48E-29 | Migraine without aura |
| BLCA | trans | rs1056667 | 1 | rs6903973 | chr6:26499942 | ZNF322B | chr9:99957633-99961910:- | 0.46 | 8.03 | 1.23E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6910899 | chr6:26524339 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.96 | 2.01E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6922824 | chr6:26553815 | ZNF322B | chr9:99957633-99961910:- | -0.48 | -8.63 | 1.66E-16 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6924838 | chr6:26571756 | ZNF322B | chr9:99957633-99961910:- | 0.46 | 8.07 | 9.04E-15 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6925703 | chr6:26521589 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.96 | 2.01E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6925895 | chr6:26572165 | ZNF322B | chr9:99957633-99961910:- | 0.46 | 8.07 | 9.04E-15 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6926629 | chr6:26499903 | ZNF322B | chr9:99957633-99961910:- | 0.46 | 8.03 | 1.23E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6930120 | chr6:26555484 | ZNF322B | chr9:99957633-99961910:- | 0.47 | 8.29 | 1.88E-15 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6932156 | chr6:26571506 | ZNF322B | chr9:99957633-99961910:- | 0.46 | 8.07 | 9.04E-15 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6933176 | chr6:26540178 | ZNF322B | chr9:99957633-99961910:- | 0.46 | 8.01 | 1.43E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs6940053 | chr6:26562122 | ZNF322B | chr9:99957633-99961910:- | 0.47 | 8.29 | 1.87E-15 | Educational attainment |